How to do dockings

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Revision as of 20:12, 25 May 2018 by Kevin (talk | contribs) (Looking at the results)
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Looking at the results

Make a namelist

find res -type d > namelist

Combine ligands and receptors

sh make_combine.sh

Here is a sample vmd visualization file for TBL1: render.vmd

Rendering

Move selected directories

Make a namelist

head -25 sort | awk '{print $1}' | cut -d/ -f1-5 > tmp

Move the directories

for ii in $(cat tmp); do cp -r $ii res; done