User contributions
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- 09:42, 6 May 2021 (diff | hist) . . (+65) . . How to install GPU cards on Linux (current)
- 09:42, 6 May 2021 (diff | hist) . . (-15) . . How to install GPU cards on Linux
- 09:41, 6 May 2021 (diff | hist) . . (+104) . . How to install GPU cards on Linux
- 09:39, 6 May 2021 (diff | hist) . . (+9) . . How to install GPU cards on Linux
- 06:31, 21 April 2021 (diff | hist) . . (-44) . . How-to (→Analysis) (current)
- 06:29, 21 April 2021 (diff | hist) . . (+43) . . How to use some common python packages (current)
- 06:12, 21 April 2021 (diff | hist) . . (+1) . . How to hack the filesystem (→How to mount an external disk on Ubuntu) (current)
- 09:21, 20 April 2021 (diff | hist) . . (-36) . . How to do MDs (→Standard MD (Protein only)) (current)
- 09:21, 20 April 2021 (diff | hist) . . (-8) . . How to do MDs (→Standard MD (Protein only))
- 09:20, 20 April 2021 (diff | hist) . . (-2) . . How to do MDs (→Integrator)
- 09:20, 20 April 2021 (diff | hist) . . (0) . . How to do MDs (→General Q&A)
- 09:19, 20 April 2021 (diff | hist) . . (-1) . . How to do MDs
- 07:47, 30 March 2021 (diff | hist) . . (+6) . . How to predict the structure of a protein (→Useful servers) (current)
- 07:43, 30 March 2021 (diff | hist) . . (+114) . . N How to predict the structure of a protein (Created page with "=Useful servers= [http://prodata.swmed.edu/promals3d/promals3d.php PROMALS3D] - Structure-based sequence alignment")
- 07:42, 30 March 2021 (diff | hist) . . (+47) . . How-to (→Simulations)
- 06:41, 24 March 2021 (diff | hist) . . (+141) . . How to make figures for publications (current)
- 05:35, 24 March 2021 (diff | hist) . . (+135) . . How to do free energy perturbation (current)
- 05:28, 24 March 2021 (diff | hist) . . (+6) . . How to do free energy perturbation (→Gromacs)
- 05:27, 24 March 2021 (diff | hist) . . (+184) . . How to do free energy perturbation (→Gromacs)
- 05:26, 24 March 2021 (diff | hist) . . (+51) . . How to do free energy perturbation (→Gromacs)
- 05:26, 24 March 2021 (diff | hist) . . (0) . . How to do free energy perturbation (→Gromacs)
- 05:25, 24 March 2021 (diff | hist) . . (+644) . . N How to do free energy perturbation (Created page with "=Useful= ==NAMD== JC made two great tutorials on FEP using NAMD: [http://www.ks.uiuc.edu/Training/Tutorials/#namd] # Protein:ligand Standard Binding Free Energies: A Tutoria...")
- 05:16, 24 March 2021 (diff | hist) . . (+40) . . How-to (→Simulations)
- 09:41, 10 March 2021 (diff | hist) . . (+69) . . Software (current)
- 15:35, 7 March 2021 (diff | hist) . . (+41) . . How to do Direct Coupling Analysis (→Multisequence alignment) (current)
- 00:40, 7 March 2021 (diff | hist) . . (-1) . . How to do dockings (→Combine the ligand with the receptor (proteins)) (current)
- 00:40, 7 March 2021 (diff | hist) . . (+426) . . How to do dockings (→Combine the ligand with the receptor (proteins))
- 10:43, 6 March 2021 (diff | hist) . . (+239) . . Software
- 02:46, 2 March 2021 (diff | hist) . . (-11) . . How to parameterise ligands (→charmm2gmx) (current)
- 02:34, 2 March 2021 (diff | hist) . . (-11) . . How to parameterise ligands (→charmm2gmx)
- 02:22, 2 March 2021 (diff | hist) . . (+145) . . How to parameterise ligands (→CGenFF)
- 02:27, 1 March 2021 (diff | hist) . . (+228) . . How to prepare a system (→Protein-only systems) (current)
- 01:17, 28 February 2021 (diff | hist) . . (-4) . . How to do dockings (→Prepare ligands)
- 01:16, 28 February 2021 (diff | hist) . . (-4) . . How to do dockings (→Usage)
- 03:56, 27 February 2021 (diff | hist) . . (+23) . . How to prepare a system (→Make rotations of coordinates)
- 00:16, 19 February 2021 (diff | hist) . . (+188) . . Software (→pyMBAR)
- 00:11, 19 February 2021 (diff | hist) . . (-23) . . Software (→pyMBAR)
- 23:51, 18 February 2021 (diff | hist) . . (+23) . . Software (→pyMBAR)
- 23:50, 18 February 2021 (diff | hist) . . (+178) . . Software (→pyMBAR)
- 23:47, 18 February 2021 (diff | hist) . . (+39) . . Software (→pyMBAR)
- 23:47, 18 February 2021 (diff | hist) . . (+10) . . Software
- 21:02, 14 February 2021 (diff | hist) . . (+1,804) . . How to do MDs (→Gromacs)
- 20:36, 14 February 2021 (diff | hist) . . (+145) . . How to parameterise ligands (→charmm2gmx)
- 19:41, 14 February 2021 (diff | hist) . . (+25) . . Software (→Modeler)
- 19:41, 14 February 2021 (diff | hist) . . (+100) . . Software (→Modeler)
- 19:40, 14 February 2021 (diff | hist) . . (+214) . . How to prepare a system (→Add missing residues using Modeller)
- 19:38, 14 February 2021 (diff | hist) . . (+4) . . How to prepare a system (→RNA)
- 19:38, 14 February 2021 (diff | hist) . . (-1,169) . . How to prepare a system
- 19:35, 14 February 2021 (diff | hist) . . (0) . . How to prepare a system
- 19:35, 14 February 2021 (diff | hist) . . (-16) . . How to prepare a system
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